Protein–RNA interactions for Protein: Q9H930

SP140L, Nuclear body protein SP140-like protein, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP140LQ9H930 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SP140LQ9H930 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SP140LQ9H930 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 PCDHB17P-201ENST00000539533 2393 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SP140LQ9H930 MIR149-201ENST00000384879 89 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 MIR1238-201ENST00000408483 83 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.04■□□□□ 0.16
SP140LQ9H930 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.04■□□□□ 0.16
SP140LQ9H930 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 SNORA78-201ENST00000459373 127 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SP140LQ9H930 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.04■□□□□ 0.16
SP140LQ9H930 MIR3180-4-201ENST00000582223 153 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SP140LQ9H930 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.04■□□□□ 0.16
SP140LQ9H930 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 AC036111.1-201ENST00000533973 1582 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SP140LQ9H930 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SP140LQ9H930 CROCCP2-202ENST00000412962 2773 ntBASIC16.04■□□□□ 0.16
SP140LQ9H930 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SP140LQ9H930 AC008741.2-201ENST00000612792 3115 ntBASIC16.03■□□□□ 0.16
SP140LQ9H930 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SP140LQ9H930 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 AC026691.1-201ENST00000602502 2017 ntBASIC16.03■□□□□ 0.16
SP140LQ9H930 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.03■□□□□ 0.16
SP140LQ9H930 TSPY14P-201ENST00000303979 915 ntBASIC16.03■□□□□ 0.16
SP140LQ9H930 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.03■□□□□ 0.16
SP140LQ9H930 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.03■□□□□ 0.16
SP140LQ9H930 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 MIR4497-201ENST00000583208 89 ntBASIC16.03■□□□□ 0.16
SP140LQ9H930 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SP140LQ9H930 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.03■□□□□ 0.16
SP140LQ9H930 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.03■□□□□ 0.16
SP140LQ9H930 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SP140LQ9H930 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 AL163051.1-201ENST00000569214 1512 ntBASIC16.03■□□□□ 0.16
SP140LQ9H930 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.03■□□□□ 0.16
SP140LQ9H930 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 AC009102.3-201ENST00000623118 1491 ntBASIC16.03■□□□□ 0.16
SP140LQ9H930 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP140LQ9H930 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.02■□□□□ 0.16
SP140LQ9H930 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SP140LQ9H930 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SP140LQ9H930 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.02■□□□□ 0.16
SP140LQ9H930 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms