Protein–RNA interactions for Protein: Q9H2J4

PDCL3, Phosducin-like protein 3, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3Q9H2J4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 OR6D1P-203ENST00000641209 4860 ntBASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCL3Q9H2J4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 TSPY15P-201ENST00000457163 923 ntBASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 AC066615.1-201ENST00000640911 628 ntBASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 KRT8P45-201ENST00000414328 1447 ntBASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 LYSMD4-203ENST00000378904 2122 ntBASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDCL3Q9H2J4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 AC034236.2-201ENST00000606662 1610 ntBASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 AC036111.1-201ENST00000533973 1582 ntBASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 MMP23A-201ENST00000234610 1017 ntBASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 NAPSB-206ENST00000562112 1266 ntBASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 AL023803.3-201ENST00000615559 522 ntBASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDCL3Q9H2J4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDCL3Q9H2J4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms