Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 AC046185.3-201ENST00000623228 1824 ntBASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 AC132938.5-201ENST00000624980 1813 ntBASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 SLC25A1P3-201ENST00000395415 828 ntBASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.65■□□□□ 0.74
CCSER1Q9C0I3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.64■□□□□ 0.74
CCSER1Q9C0I3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.64■□□□□ 0.74
CCSER1Q9C0I3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCSER1Q9C0I3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCSER1Q9C0I3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CCSER1Q9C0I3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.64■□□□□ 0.73
CCSER1Q9C0I3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 FZD10-202ENST00000539839 3282 ntBASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.63■□□□□ 0.73
CCSER1Q9C0I3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 PMPCAP1-201ENST00000508114 1576 ntBASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 AC009336.1-201ENST00000608941 1553 ntBASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 AC099336.1-202ENST00000602961 463 ntBASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 AC093458.2-201ENST00000623150 629 ntBASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms