Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 AC026691.1-201ENST00000602502 2017 ntBASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 MIR663A-201ENST00000385250 93 ntBASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 MCCD1P1-208ENST00000445732 328 ntBASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 AC097658.1-201ENST00000475555 843 ntBASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PAUPAR-201ENST00000630360 2965 ntBASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM3Q9BZL3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 AL662844.4-201ENST00000606367 2838 ntBASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 AL023284.2-201ENST00000405850 579 ntBASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM3Q9BZL3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms