Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC093010.1-201ENST00000473625 1624 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC092368.3-202ENST00000574180 1591 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 GXYLT1P2-201ENST00000433312 1230 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PRKY-204ENST00000533551 1019 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC133552.2-202ENST00000575694 574 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC120498.8-201ENST00000614275 531 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 AL603756.1-201ENST00000606511 2163 ntBASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC4.75□□□□□ -1.65
LCE3DQ9BYE3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms