Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.37□□□□□ -0.27
VGLL1Q99990 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 AL121761.2-201ENST00000598007 1648 ntBASIC13.37□□□□□ -0.27
VGLL1Q99990 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.37□□□□□ -0.27
VGLL1Q99990 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VGLL1Q99990 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
VGLL1Q99990 KRT17P2-201ENST00000300992 1314 ntBASIC13.37□□□□□ -0.27
VGLL1Q99990 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VGLL1Q99990 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.37□□□□□ -0.27
VGLL1Q99990 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 FER1L4-210ENST00000615531 5998 ntBASIC13.36□□□□□ -0.27
VGLL1Q99990 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VGLL1Q99990 ECEL1P2-202ENST00000465689 757 ntBASIC13.36□□□□□ -0.27
VGLL1Q99990 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
VGLL1Q99990 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.36□□□□□ -0.27
VGLL1Q99990 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.36□□□□□ -0.27
VGLL1Q99990 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 NAPSB-206ENST00000562112 1266 ntBASIC13.36□□□□□ -0.27
VGLL1Q99990 AL512604.3-201ENST00000569583 964 ntBASIC13.36□□□□□ -0.27
VGLL1Q99990 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.36□□□□□ -0.27
VGLL1Q99990 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 AC010947.1-201ENST00000623454 693 ntBASIC13.36□□□□□ -0.27
VGLL1Q99990 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VGLL1Q99990 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.36□□□□□ -0.27
VGLL1Q99990 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VGLL1Q99990 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.36□□□□□ -0.27
VGLL1Q99990 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VGLL1Q99990 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VGLL1Q99990 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VGLL1Q99990 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VGLL1Q99990 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 AL596257.1-201ENST00000641463 2694 ntBASIC13.35□□□□□ -0.27
VGLL1Q99990 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.35□□□□□ -0.27
VGLL1Q99990 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.35□□□□□ -0.27
VGLL1Q99990 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.35□□□□□ -0.27
VGLL1Q99990 TSPY15P-201ENST00000457163 923 ntBASIC13.35□□□□□ -0.27
VGLL1Q99990 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.35□□□□□ -0.27
VGLL1Q99990 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.35□□□□□ -0.27
VGLL1Q99990 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.35□□□□□ -0.27
VGLL1Q99990 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.35□□□□□ -0.27
VGLL1Q99990 NEK4P2-201ENST00000580004 1012 ntBASIC13.35□□□□□ -0.27
VGLL1Q99990 FAM87A-204ENST00000613235 858 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms