Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 AD000864.1-201ENST00000624076 2295 ntBASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 IER3-202ENST00000376377 1350 ntBASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 KRT18P1-202ENST00000452408 1331 ntBASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 AC233702.3-201ENST00000578656 1387 ntBASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB18PQ96TA0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 DRAXINP1-201ENST00000437611 948 ntBASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 KRT18P35-201ENST00000510488 1269 ntBASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 MIR3180-1-201ENST00000580374 94 ntBASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 MIR3180-3-201ENST00000584616 94 ntBASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 AP002414.4-201ENST00000589764 1148 ntBASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB18PQ96TA0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 FAM220CP-201ENST00000395253 831 ntBASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 AL358472.4-201ENST00000633140 710 ntBASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB18PQ96TA0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms