Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 AL391807.1-203ENST00000604392 2365 ntBASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CHAMP1Q96JM3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 AC087499.1-201ENST00000418141 1075 ntBASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 SPDYE15P-201ENST00000424157 909 ntBASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 DDX43P3-201ENST00000441064 443 ntBASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 AC128688.1-201ENST00000487626 519 ntBASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 AC113404.2-201ENST00000507884 177 ntBASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.39■□□□□ 0.85
CHAMP1Q96JM3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 AC024563.2-201ENST00000603282 481 ntBASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 AL138966.2-201ENST00000621997 464 ntBASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 AC141257.4-201ENST00000634557 245 ntBASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 AC136944.6-201ENST00000634818 245 ntBASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHAMP1Q96JM3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 AC092597.1-201ENST00000487352 616 ntBASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHAMP1Q96JM3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms