Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 FAM185BP-201ENST00000443595 716 ntBASIC18.7■□□□□ 0.58
TIFAQ96CG3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 AL513480.1-201ENST00000451731 511 ntBASIC18.7■□□□□ 0.58
TIFAQ96CG3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 AC022494.1-201ENST00000466044 728 ntBASIC18.7■□□□□ 0.58
TIFAQ96CG3 IGHV3-42-201ENST00000520410 361 ntBASIC18.7■□□□□ 0.58
TIFAQ96CG3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 AP001059.3-201ENST00000619053 235 ntBASIC18.7■□□□□ 0.58
TIFAQ96CG3 AL390754.1-201ENST00000619088 582 ntBASIC18.7■□□□□ 0.58
TIFAQ96CG3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TIFAQ96CG3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIFAQ96CG3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 BX323043.1-201ENST00000641006 1765 ntBASIC18.69■□□□□ 0.58
TIFAQ96CG3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.69■□□□□ 0.58
TIFAQ96CG3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIFAQ96CG3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
TIFAQ96CG3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 LINC00982-205ENST00000420957 435 ntBASIC18.68■□□□□ 0.58
TIFAQ96CG3 AL512638.1-201ENST00000457493 794 ntBASIC18.68■□□□□ 0.58
TIFAQ96CG3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 AC018445.3-201ENST00000624177 1945 ntBASIC18.68■□□□□ 0.58
TIFAQ96CG3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TIFAQ96CG3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIFAQ96CG3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIFAQ96CG3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TIFAQ96CG3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIFAQ96CG3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIFAQ96CG3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TIFAQ96CG3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.67■□□□□ 0.58
TIFAQ96CG3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIFAQ96CG3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.67■□□□□ 0.58
TIFAQ96CG3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIFAQ96CG3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms