Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
APH1AQ96BI3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.6■□□□□ 0.09
APH1AQ96BI3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
APH1AQ96BI3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.6■□□□□ 0.09
APH1AQ96BI3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
APH1AQ96BI3 AC012317.2-201ENST00000623305 2251 ntBASIC15.6■□□□□ 0.09
APH1AQ96BI3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.6■□□□□ 0.09
APH1AQ96BI3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
APH1AQ96BI3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
APH1AQ96BI3 AC008764.6-201ENST00000595909 2069 ntBASIC15.59■□□□□ 0.09
APH1AQ96BI3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 EMBP1-201ENST00000458200 901 ntBASIC15.59■□□□□ 0.09
APH1AQ96BI3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
APH1AQ96BI3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.59■□□□□ 0.09
APH1AQ96BI3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APH1AQ96BI3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APH1AQ96BI3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.58■□□□□ 0.09
APH1AQ96BI3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APH1AQ96BI3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APH1AQ96BI3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.58■□□□□ 0.09
APH1AQ96BI3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.58■□□□□ 0.09
APH1AQ96BI3 AC006116.8-202ENST00000587620 1550 ntBASIC15.58■□□□□ 0.09
APH1AQ96BI3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APH1AQ96BI3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APH1AQ96BI3 AC018470.1-201ENST00000624790 3129 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 AKR1C7P-201ENST00000305623 895 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 AC002558.1-201ENST00000488906 803 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 AC106795.1-205ENST00000512851 1056 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 AC109462.3-201ENST00000573934 613 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 AC008608.2-201ENST00000606089 416 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 AP001269.4-201ENST00000609611 512 ntBASIC15.58■□□□□ 0.08
APH1AQ96BI3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.58■□□□□ 0.08
APH1AQ96BI3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APH1AQ96BI3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms