Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR1233-1-201ENST00000408722 82 ntBASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 AC006116.8-202ENST00000587620 1550 ntBASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 AC004790.2-201ENST00000623588 572 ntBASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF3Q8TEJ3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 GPR89P-201ENST00000407924 1495 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 YBX2P1-201ENST00000394192 760 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 AC040169.1-201ENST00000565382 521 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 MIR4751-201ENST00000578027 74 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 AC010327.4-202ENST00000591484 748 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 AC055717.3-201ENST00000622967 595 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 AL805961.1-202ENST00000641562 540 ntBASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF3Q8TEJ3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 AC046185.3-201ENST00000623228 1824 ntBASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.77■□□□□ 0.92
SH3RF3Q8TEJ3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 AL135999.2-201ENST00000622438 1686 ntBASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SH3RF3Q8TEJ3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms