Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC9.66□□□□□ -0.86
SPTSSBQ8NFR3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 RET-205ENST00000615310 4337 ntTSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 AL031963.3-201ENST00000606441 850 ntBASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SPTSSBQ8NFR3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 ANO7L1-203ENST00000602586 1720 ntBASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
SPTSSBQ8NFR3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TEX21P-204ENST00000641479 1693 ntBASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 AL121761.2-201ENST00000598007 1648 ntBASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 PHGDH-210ENST00000641115 1638 ntBASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 AC007950.2-201ENST00000615045 2347 ntBASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ATP5G2P3-201ENST00000429083 425 ntBASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms