Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 SART3-203ENST00000546611 1184 ntBASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 AC104692.2-201ENST00000603054 253 ntBASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRAM1L1Q8N609 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 SIGLEC30P-201ENST00000455569 941 ntBASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 AL160237.2-201ENST00000556165 472 ntBASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 TP73-AS1-207ENST00000624167 988 ntBASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 AL022326.1-202ENST00000641533 845 ntBASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 LYSMD4-203ENST00000378904 2122 ntBASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAM1L1Q8N609 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 PRYP5-201ENST00000451909 266 ntBASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 BX005266.1-201ENST00000473402 457 ntBASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 AC046185.3-201ENST00000623228 1824 ntBASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 AC148477.5-201ENST00000625164 1645 ntBASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms