Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ARHGEF39Q8N4T4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 LYSMD4-203ENST00000378904 2122 ntBASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 AL031284.1-201ENST00000419297 478 ntBASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 RPS2P1-201ENST00000434010 821 ntBASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 AL049840.3-201ENST00000602669 611 ntBASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARHGEF39Q8N4T4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 AL133373.2-201ENST00000623187 2828 ntBASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
ARHGEF39Q8N4T4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.54■□□□□ 0.24
ARHGEF39Q8N4T4 KRT18P27-201ENST00000427733 1299 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms