Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 AL020989.1-201ENST00000422979 469 ntBASIC17.89■□□□□ 0.45
CHPFQ8IZ52 AC116407.2-201ENST00000613639 860 ntBASIC17.89■□□□□ 0.45
CHPFQ8IZ52 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 AC135776.1-201ENST00000319817 2481 ntBASIC17.89■□□□□ 0.45
CHPFQ8IZ52 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.89■□□□□ 0.45
CHPFQ8IZ52 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHPFQ8IZ52 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 AC007967.2-201ENST00000432613 625 ntBASIC17.88■□□□□ 0.45
CHPFQ8IZ52 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 RNA5SP416-201ENST00000516838 111 ntBASIC17.88■□□□□ 0.45
CHPFQ8IZ52 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PGM5P2-202ENST00000637225 1043 ntBASIC17.88■□□□□ 0.45
CHPFQ8IZ52 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHPFQ8IZ52 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AC018470.1-201ENST00000624790 3129 ntBASIC17.87■□□□□ 0.45
CHPFQ8IZ52 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AC009947.1-201ENST00000444350 727 ntBASIC17.87■□□□□ 0.45
CHPFQ8IZ52 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AL353593.2-201ENST00000602529 1483 ntBASIC17.87■□□□□ 0.45
CHPFQ8IZ52 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 AL049757.1-201ENST00000616842 1596 ntBASIC17.87■□□□□ 0.45
CHPFQ8IZ52 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHPFQ8IZ52 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 NOC2LP2-201ENST00000407594 1944 ntBASIC17.86■□□□□ 0.45
CHPFQ8IZ52 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.86■□□□□ 0.45
CHPFQ8IZ52 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms