Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 AL138831.2-201ENST00000606564 490 ntBASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 AL138688.1-201ENST00000624851 1594 ntBASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 AL645608.8-201ENST00000606034 2086 ntBASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 STK33P1-201ENST00000423835 1218 ntBASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 VENTXP7-201ENST00000475503 772 ntBASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 AC091076.1-201ENST00000610741 619 ntBASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC116Q8IYX3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC116Q8IYX3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 TPSP2-201ENST00000561760 610 ntBASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 AP005901.3-202ENST00000581653 237 ntBASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 AC069148.1-201ENST00000608741 768 ntBASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 AC233702.3-201ENST00000578656 1387 ntBASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 AC011270.2-201ENST00000624293 2550 ntBASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms