Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
ZNF440Q8IYI8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ZNF440Q8IYI8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 Z69720.1-201ENST00000601483 472 ntBASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 KRT18P1-202ENST00000452408 1331 ntBASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 CROCCP2-202ENST00000412962 2773 ntBASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF440Q8IYI8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 DRAXINP1-201ENST00000437611 948 ntBASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 AC109462.3-201ENST00000573934 613 ntBASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 AP000550.4-202ENST00000639755 178 ntBASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 PP12613-201ENST00000424958 2230 ntBASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF440Q8IYI8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZNF440Q8IYI8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms