Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 AC096633.1-201ENST00000422446 749 ntBASIC18.3■□□□□ 0.52
RFX6Q8HWS3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX6Q8HWS3 CROCCP1-201ENST00000426910 5675 ntBASIC18.29■□□□□ 0.52
RFX6Q8HWS3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 AC005104.2-201ENST00000427818 678 ntBASIC18.29■□□□□ 0.52
RFX6Q8HWS3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 AC124864.1-201ENST00000623408 392 ntBASIC18.29■□□□□ 0.52
RFX6Q8HWS3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 AC010460.3-201ENST00000511359 1579 ntBASIC18.29■□□□□ 0.52
RFX6Q8HWS3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
RFX6Q8HWS3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 AC011498.5-201ENST00000592027 486 ntBASIC18.28■□□□□ 0.52
RFX6Q8HWS3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 AL592071.1-201ENST00000611956 408 ntBASIC18.28■□□□□ 0.52
RFX6Q8HWS3 IGHV3-41-201ENST00000613121 348 ntBASIC18.28■□□□□ 0.52
RFX6Q8HWS3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 LYSMD4-203ENST00000378904 2122 ntBASIC18.28■□□□□ 0.52
RFX6Q8HWS3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX6Q8HWS3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms