Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 IGLL3P-201ENST00000412472 434 ntBASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 STK19B-204ENST00000512515 211 ntBASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 PDPK2P-202ENST00000562415 1191 ntBASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 ELL2P1-201ENST00000413990 1906 ntBASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 REXO1L11P-201ENST00000620964 1927 ntBASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 AC068880.1-201ENST00000507289 2297 ntBASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAI1Q7Z5J4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 AC005829.1-201ENST00000570002 483 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 AL078644.1-201ENST00000609881 752 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 AC009336.1-201ENST00000608941 1553 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 COX5BP2-201ENST00000392354 334 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 AP000344.2-201ENST00000512987 629 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 IGHV3-65-201ENST00000523210 341 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 C20orf181-201ENST00000623918 480 ntBASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAI1Q7Z5J4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RAI1Q7Z5J4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms