Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AC010460.3-201ENST00000511359 1579 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 COX5BP2-201ENST00000392354 334 ntBASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 CHCHD2P8-201ENST00000429873 447 ntBASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 IGHV3-41-201ENST00000613121 348 ntBASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 AP000550.4-202ENST00000639755 178 ntBASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NHLRC1Q6VVB1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 IER3-202ENST00000376377 1350 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 BX276092.5-203ENST00000456199 560 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 MIR3180-1-201ENST00000580374 94 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 AP005901.3-202ENST00000581653 237 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 MIR3180-3-201ENST00000584616 94 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 AC010331.1-201ENST00000611423 582 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 AL358472.4-201ENST00000633140 710 ntBASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
NHLRC1Q6VVB1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 PP12613-201ENST00000424958 2230 ntBASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AC108860.2-201ENST00000562760 2183 ntBASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 HLA-J-201ENST00000462773 1622 ntBASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms