Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 AC009336.1-201ENST00000608941 1553 ntBASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 HLA-J-201ENST00000462773 1622 ntBASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 AC090340.1-201ENST00000620778 4980 ntBASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRAT1Q6PJG6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 BX005266.1-201ENST00000473402 457 ntBASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 AC025062.2-201ENST00000605477 670 ntBASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BRAT1Q6PJG6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.58■□□□□ 0.41
BRAT1Q6PJG6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 HLA-A-201ENST00000376802 1334 ntBASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 AL031284.1-201ENST00000419297 478 ntBASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 AP001005.1-201ENST00000571755 1248 ntBASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 AC133963.1-201ENST00000504166 1679 ntBASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.58■□□□□ 0.4
BRAT1Q6PJG6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 AC093909.1-201ENST00000504731 1122 ntBASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAT1Q6PJG6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms