Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC009949.1-201ENST00000623048 1830 ntBASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 AC104692.2-201ENST00000603054 253 ntBASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD3Q6PCD5 FLJ13224-201ENST00000313737 1514 ntBASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RFWD3Q6PCD5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 AP001269.4-201ENST00000609611 512 ntBASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.33■□□□□ 0.52
RFWD3Q6PCD5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 FAM220CP-201ENST00000395253 831 ntBASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 AC009078.2-202ENST00000463353 338 ntBASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 AL121912.1-201ENST00000603683 238 ntBASIC18.32■□□□□ 0.52
RFWD3Q6PCD5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms