Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 PCED1CP-201ENST00000419887 785 ntBASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 BX276092.5-203ENST00000456199 560 ntBASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 AP005901.3-202ENST00000581653 237 ntBASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 AC019129.2-201ENST00000609837 1235 ntBASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 AL590326.2-201ENST00000625139 305 ntBASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 CHCHD2P8-201ENST00000429873 447 ntBASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 AC087388.1-201ENST00000571370 1112 ntBASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 AC011840.4-201ENST00000578471 627 ntBASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 AL121672.3-201ENST00000608644 468 ntBASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF549Q6P9A3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 AP002383.4-201ENST00000442518 975 ntBASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 AC002558.1-201ENST00000488906 803 ntBASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms