Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQA1Q5Y7H0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQA1Q5Y7H0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQA1Q5Y7H0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQA1Q5Y7H0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC008764.6-201ENST00000595909 2069 ntBASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 COX5BP2-201ENST00000392354 334 ntBASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC091304.2-201ENST00000564639 760 ntBASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AL591684.3-201ENST00000605187 298 ntBASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC010460.3-201ENST00000511359 1579 ntBASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC012317.2-201ENST00000623305 2251 ntBASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1Q5Y7H0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC103564.2-201ENST00000432853 1299 ntBASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC011467.2-201ENST00000598425 242 ntBASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1Q5Y7H0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 GNAS-203ENST00000306120 1878 ntBASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms