Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEF9Q5VWM5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF9Q5VWM5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEF9Q5VWM5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF9Q5VWM5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 FAM220CP-201ENST00000395253 831 ntBASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 AC009533.2-201ENST00000543664 586 ntBASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF9Q5VWM5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 RCN1P2-201ENST00000398357 915 ntBASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 INTS4P1-201ENST00000438455 1935 ntBASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF9Q5VWM5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 PCDHA12-202ENST00000613593 2588 ntBASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF9Q5VWM5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 AL353593.2-201ENST00000602529 1483 ntBASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 VENTXP7-201ENST00000475503 772 ntBASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF9Q5VWM5 AC074051.2-201ENST00000565115 352 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms