Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 AP003400.6-201ENST00000624698 740 ntBASIC18.57■□□□□ 0.56
VARS2Q5ST30 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARS2Q5ST30 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
VARS2Q5ST30 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 RPS15P9-201ENST00000494093 319 ntBASIC18.56■□□□□ 0.56
VARS2Q5ST30 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 AC040169.1-201ENST00000565382 521 ntBASIC18.56■□□□□ 0.56
VARS2Q5ST30 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 AC027796.2-201ENST00000575326 344 ntBASIC18.56■□□□□ 0.56
VARS2Q5ST30 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 AC064836.3-201ENST00000607928 673 ntBASIC18.56■□□□□ 0.56
VARS2Q5ST30 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VARS2Q5ST30 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VARS2Q5ST30 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 REXO1L11P-201ENST00000620964 1927 ntBASIC18.55■□□□□ 0.56
VARS2Q5ST30 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.55■□□□□ 0.56
VARS2Q5ST30 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 AC055717.3-201ENST00000622967 595 ntBASIC18.55■□□□□ 0.56
VARS2Q5ST30 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms