Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 FAM220CP-201ENST00000395253 831 ntBASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 RPS2P1-201ENST00000434010 821 ntBASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 HNRNPDP1-201ENST00000439535 754 ntBASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AC018712.1-201ENST00000455767 687 ntBASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAP47Q5SQN1 AL356309.3-201ENST00000624132 1934 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 AC093010.1-201ENST00000473625 1624 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 MIR940-201ENST00000401276 94 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 AC021087.4-201ENST00000563761 564 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 MIR7706-201ENST00000613747 67 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 FAM215A-202ENST00000632077 792 ntBASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
SNAP47Q5SQN1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 AL096828.2-201ENST00000567259 1965 ntBASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 RPS2P28-201ENST00000314255 741 ntBASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 AC139887.3-201ENST00000568585 713 ntBASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms