Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.41■□□□□ 0.38
CCDC153Q494R4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 KRT18P48-201ENST00000434763 852 ntBASIC17.41■□□□□ 0.38
CCDC153Q494R4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 AL136038.4-201ENST00000603606 1261 ntBASIC17.41■□□□□ 0.38
CCDC153Q494R4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC153Q494R4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC153Q494R4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 AC046158.3-201ENST00000624947 2558 ntBASIC17.4■□□□□ 0.38
CCDC153Q494R4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 RASA4DP-201ENST00000460726 1199 ntBASIC17.4■□□□□ 0.38
CCDC153Q494R4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 MIR4497-201ENST00000583208 89 ntBASIC17.4■□□□□ 0.38
CCDC153Q494R4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC153Q494R4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC153Q494R4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC153Q494R4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC153Q494R4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC153Q494R4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.38
CCDC153Q494R4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC153Q494R4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC153Q494R4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC153Q494R4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC153Q494R4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms