Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 CRYGEP-201ENST00000412192 528 ntBASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 SPCS2P1-201ENST00000561636 679 ntBASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 AC011467.4-201ENST00000594891 528 ntBASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 VN2R19P-201ENST00000442399 1052 ntBASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AC106028.4-201ENST00000614509 607 ntBASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AL589182.2-201ENST00000619332 1049 ntBASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AL513190.1-201ENST00000621254 727 ntBASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTC1Q2NKJ3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 SPDYE21P-201ENST00000413323 827 ntBASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 HCG4B-203ENST00000450128 991 ntBASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AC239800.4-201ENST00000603712 296 ntBASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AC027612.4-201ENST00000605371 583 ntBASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 AC004706.3-202ENST00000621574 984 ntBASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CTC1Q2NKJ3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 AC008764.6-201ENST00000595909 2069 ntBASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms