Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.07■□□□□ 0.32
PDX1P52945 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDX1P52945 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 AC079776.2-201ENST00000641154 1609 ntBASIC17.07■□□□□ 0.32
PDX1P52945 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
PDX1P52945 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.07■□□□□ 0.32
PDX1P52945 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 AC097374.2-201ENST00000618617 1306 ntBASIC17.07■□□□□ 0.32
PDX1P52945 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PDX1P52945 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDX1P52945 YBX2P1-201ENST00000394192 760 ntBASIC17.07■□□□□ 0.32
PDX1P52945 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.07■□□□□ 0.32
PDX1P52945 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.07■□□□□ 0.32
PDX1P52945 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.07■□□□□ 0.32
PDX1P52945 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.07■□□□□ 0.32
PDX1P52945 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.07■□□□□ 0.32
PDX1P52945 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.07■□□□□ 0.32
PDX1P52945 AC073592.4-201ENST00000623827 446 ntBASIC17.07■□□□□ 0.32
PDX1P52945 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.07■□□□□ 0.32
PDX1P52945 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDX1P52945 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
PDX1P52945 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDX1P52945 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PDX1P52945 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 PMPCAP1-201ENST00000508114 1576 ntBASIC17.06■□□□□ 0.32
PDX1P52945 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.06■□□□□ 0.32
PDX1P52945 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PDX1P52945 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDX1P52945 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDX1P52945 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.06■□□□□ 0.32
PDX1P52945 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.06■□□□□ 0.32
PDX1P52945 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.06■□□□□ 0.32
PDX1P52945 AC009947.1-201ENST00000444350 727 ntBASIC17.06■□□□□ 0.32
PDX1P52945 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.06■□□□□ 0.32
PDX1P52945 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.06■□□□□ 0.32
PDX1P52945 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.06■□□□□ 0.32
PDX1P52945 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 AL139424.1-201ENST00000607572 797 ntBASIC17.06■□□□□ 0.32
PDX1P52945 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.06■□□□□ 0.32
PDX1P52945 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDX1P52945 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 GMCL1P1-201ENST00000463439 1581 ntBASIC17.06■□□□□ 0.32
PDX1P52945 AC010460.3-201ENST00000511359 1579 ntBASIC17.06■□□□□ 0.32
PDX1P52945 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.06■□□□□ 0.32
PDX1P52945 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDX1P52945 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.05■□□□□ 0.32
PDX1P52945 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDX1P52945 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.05■□□□□ 0.32
PDX1P52945 KRT18P27-201ENST00000427733 1299 ntBASIC17.05■□□□□ 0.32
PDX1P52945 AC007967.2-201ENST00000432613 625 ntBASIC17.05■□□□□ 0.32
PDX1P52945 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.05■□□□□ 0.32
PDX1P52945 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.05■□□□□ 0.32
PDX1P52945 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.05■□□□□ 0.32
PDX1P52945 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms