Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 SLC25A1P3-201ENST00000395415 828 ntBASIC17.11■□□□□ 0.33
IDH3AP50213 AL390955.1-201ENST00000428694 934 ntBASIC17.11■□□□□ 0.33
IDH3AP50213 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.11■□□□□ 0.33
IDH3AP50213 FITM1-202ENST00000559294 800 ntBASIC17.11■□□□□ 0.33
IDH3AP50213 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 AL157888.1-201ENST00000631930 593 ntBASIC17.11■□□□□ 0.33
IDH3AP50213 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
IDH3AP50213 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.11■□□□□ 0.33
IDH3AP50213 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
IDH3AP50213 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.11■□□□□ 0.33
IDH3AP50213 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IDH3AP50213 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IDH3AP50213 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IDH3AP50213 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.1■□□□□ 0.33
IDH3AP50213 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 AL162727.3-201ENST00000635661 2787 ntBASIC17.1■□□□□ 0.33
IDH3AP50213 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.1■□□□□ 0.33
IDH3AP50213 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IDH3AP50213 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.1■□□□□ 0.33
IDH3AP50213 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.1■□□□□ 0.33
IDH3AP50213 AP000525.1-201ENST00000608286 694 ntBASIC17.1■□□□□ 0.33
IDH3AP50213 AL139327.4-201ENST00000612362 153 ntBASIC17.1■□□□□ 0.33
IDH3AP50213 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IDH3AP50213 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.1■□□□□ 0.33
IDH3AP50213 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3AP50213 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 INGX-201ENST00000359239 846 ntBASIC17.09■□□□□ 0.33
IDH3AP50213 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.09■□□□□ 0.33
IDH3AP50213 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ITM2C-210ENST00000620962 501 ntBASIC17.09■□□□□ 0.33
IDH3AP50213 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3AP50213 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3AP50213 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IDH3AP50213 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms