Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRA4P48169 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRA4P48169 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRA4P48169 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.64■□□□□ 0.25
GABRA4P48169 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 AC106730.1-201ENST00000566722 1090 ntBASIC16.64■□□□□ 0.25
GABRA4P48169 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRA4P48169 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GABRA4P48169 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.64■□□□□ 0.25
GABRA4P48169 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABRA4P48169 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABRA4P48169 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GABRA4P48169 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.63■□□□□ 0.25
GABRA4P48169 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GABRA4P48169 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 RPL13AP23-201ENST00000480739 586 ntBASIC16.63■□□□□ 0.25
GABRA4P48169 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.63■□□□□ 0.25
GABRA4P48169 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 AC006557.2-201ENST00000592985 1240 ntBASIC16.63■□□□□ 0.25
GABRA4P48169 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
GABRA4P48169 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
GABRA4P48169 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABRA4P48169 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
GABRA4P48169 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
GABRA4P48169 NCF1C-201ENST00000438382 1427 ntBASIC16.62■□□□□ 0.25
GABRA4P48169 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GABRA4P48169 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.62■□□□□ 0.25
GABRA4P48169 MIR574-201ENST00000385209 96 ntBASIC16.62■□□□□ 0.25
GABRA4P48169 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.62■□□□□ 0.25
GABRA4P48169 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.62■□□□□ 0.25
GABRA4P48169 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.62■□□□□ 0.25
GABRA4P48169 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.62■□□□□ 0.25
GABRA4P48169 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.62■□□□□ 0.25
GABRA4P48169 AL139327.4-201ENST00000612362 153 ntBASIC16.62■□□□□ 0.25
GABRA4P48169 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 AC117500.6-201ENST00000624871 588 ntBASIC16.62■□□□□ 0.25
GABRA4P48169 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
GABRA4P48169 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.62■□□□□ 0.25
GABRA4P48169 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GABRA4P48169 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.62■□□□□ 0.25
GABRA4P48169 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GABRA4P48169 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms