Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGCLP35914 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
HMGCLP35914 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 RBM17P3-201ENST00000417687 1192 ntBASIC17.49■□□□□ 0.39
HMGCLP35914 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGCLP35914 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGCLP35914 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.49■□□□□ 0.39
HMGCLP35914 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMGCLP35914 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGCLP35914 AP001269.4-201ENST00000609611 512 ntBASIC17.49■□□□□ 0.39
HMGCLP35914 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 REXO1L6P-202ENST00000619970 1078 ntBASIC17.49■□□□□ 0.39
HMGCLP35914 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGCLP35914 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HMGCLP35914 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HMGCLP35914 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 AC009336.1-201ENST00000608941 1553 ntBASIC17.49■□□□□ 0.39
HMGCLP35914 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGCLP35914 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLP35914 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 PP12613-201ENST00000424958 2230 ntBASIC17.48■□□□□ 0.39
HMGCLP35914 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLP35914 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLP35914 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLP35914 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGCLP35914 STK19B-204ENST00000512515 211 ntBASIC17.48■□□□□ 0.39
HMGCLP35914 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.48■□□□□ 0.39
HMGCLP35914 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGCLP35914 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMGCLP35914 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGCLP35914 AC073592.4-201ENST00000623827 446 ntBASIC17.48■□□□□ 0.39
HMGCLP35914 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGCLP35914 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGCLP35914 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGCLP35914 SIGLEC16-201ENST00000599858 1437 ntBASIC17.47■□□□□ 0.39
HMGCLP35914 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
HMGCLP35914 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
HMGCLP35914 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.47■□□□□ 0.39
HMGCLP35914 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HMGCLP35914 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 KLF4P1-201ENST00000412782 1185 ntBASIC17.47■□□□□ 0.39
HMGCLP35914 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HMGCLP35914 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HMGCLP35914 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 IFNL4P1-201ENST00000607083 540 ntBASIC17.47■□□□□ 0.39
HMGCLP35914 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HMGCLP35914 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms