Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA3P29320 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.13■□□□□ 0.33
EPHA3P29320 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.13■□□□□ 0.33
EPHA3P29320 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EPHA3P29320 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
EPHA3P29320 AC005915.1-201ENST00000624912 2018 ntBASIC17.13■□□□□ 0.33
EPHA3P29320 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EPHA3P29320 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EPHA3P29320 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.13■□□□□ 0.33
EPHA3P29320 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
EPHA3P29320 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
EPHA3P29320 NEK4P2-201ENST00000580004 1012 ntBASIC17.13■□□□□ 0.33
EPHA3P29320 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.13■□□□□ 0.33
EPHA3P29320 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
EPHA3P29320 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.13■□□□□ 0.33
EPHA3P29320 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
EPHA3P29320 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EPHA3P29320 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
EPHA3P29320 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 CROCCP1-201ENST00000426910 5675 ntBASIC17.13■□□□□ 0.33
EPHA3P29320 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA3P29320 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EPHA3P29320 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EPHA3P29320 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
EPHA3P29320 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA3P29320 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA3P29320 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA3P29320 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA3P29320 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.12■□□□□ 0.33
EPHA3P29320 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 AC011270.2-201ENST00000624293 2550 ntBASIC17.12■□□□□ 0.33
EPHA3P29320 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA3P29320 CYP2D8P-201ENST00000433633 1490 ntBASIC17.12■□□□□ 0.33
EPHA3P29320 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
EPHA3P29320 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EPHA3P29320 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.11■□□□□ 0.33
EPHA3P29320 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EPHA3P29320 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EPHA3P29320 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
EPHA3P29320 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA3P29320 AC116353.5-201ENST00000638148 1699 ntBASIC17.11■□□□□ 0.33
EPHA3P29320 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA3P29320 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA3P29320 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.11■□□□□ 0.33
EPHA3P29320 AC128688.1-201ENST00000487626 519 ntBASIC17.11■□□□□ 0.33
EPHA3P29320 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.11■□□□□ 0.33
EPHA3P29320 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA3P29320 AL355075.4-201ENST00000554988 638 ntBASIC17.11■□□□□ 0.33
EPHA3P29320 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms