Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD40P25942 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD40P25942 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.15■□□□□ 0.02
CD40P25942 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.15■□□□□ 0.02
CD40P25942 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.15■□□□□ 0.02
CD40P25942 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.15■□□□□ 0.02
CD40P25942 STK19B-204ENST00000512515 211 ntBASIC15.15■□□□□ 0.02
CD40P25942 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.15■□□□□ 0.02
CD40P25942 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.15■□□□□ 0.02
CD40P25942 AC006557.2-201ENST00000592985 1240 ntBASIC15.15■□□□□ 0.02
CD40P25942 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.15■□□□□ 0.02
CD40P25942 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.15■□□□□ 0.02
CD40P25942 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.15■□□□□ 0.02
CD40P25942 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD40P25942 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD40P25942 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD40P25942 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD40P25942 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 AC148477.5-201ENST00000625164 1645 ntBASIC15.14■□□□□ 0.01
CD40P25942 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD40P25942 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD40P25942 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.14■□□□□ 0.01
CD40P25942 AC005104.2-201ENST00000427818 678 ntBASIC15.14■□□□□ 0.01
CD40P25942 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.14■□□□□ 0.01
CD40P25942 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 AC106730.1-201ENST00000566722 1090 ntBASIC15.14■□□□□ 0.01
CD40P25942 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.14■□□□□ 0.01
CD40P25942 AL589182.2-201ENST00000619332 1049 ntBASIC15.14■□□□□ 0.01
CD40P25942 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CD40P25942 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.14■□□□□ 0.01
CD40P25942 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD40P25942 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CD40P25942 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD40P25942 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ZNF259P1-201ENST00000407656 1365 ntBASIC15.13■□□□□ 0.01
CD40P25942 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.13■□□□□ 0.01
CD40P25942 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.13■□□□□ 0.01
CD40P25942 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD40P25942 PMS2P1-201ENST00000431037 1228 ntBASIC15.13■□□□□ 0.01
CD40P25942 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.13■□□□□ 0.01
CD40P25942 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms