Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.31■□□□□ 0.04
ACKR3P25106 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.31■□□□□ 0.04
ACKR3P25106 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.31■□□□□ 0.04
ACKR3P25106 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.31■□□□□ 0.04
ACKR3P25106 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.31■□□□□ 0.04
ACKR3P25106 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.31■□□□□ 0.04
ACKR3P25106 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.31■□□□□ 0.04
ACKR3P25106 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.31■□□□□ 0.04
ACKR3P25106 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ACKR3P25106 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ACKR3P25106 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ACKR3P25106 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ACKR3P25106 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.31■□□□□ 0.04
ACKR3P25106 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACKR3P25106 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ACKR3P25106 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CROCCP1-201ENST00000426910 5675 ntBASIC15.3■□□□□ 0.04
ACKR3P25106 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ACKR3P25106 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ACKR3P25106 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ACKR3P25106 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ACKR3P25106 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ACKR3P25106 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.3■□□□□ 0.04
ACKR3P25106 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.3■□□□□ 0.04
ACKR3P25106 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.3■□□□□ 0.04
ACKR3P25106 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ACKR3P25106 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.3■□□□□ 0.04
ACKR3P25106 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ACKR3P25106 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CROCCP2-202ENST00000412962 2773 ntBASIC15.3■□□□□ 0.04
ACKR3P25106 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACKR3P25106 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.29■□□□□ 0.04
ACKR3P25106 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ACKR3P25106 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ACKR3P25106 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ACKR3P25106 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.29■□□□□ 0.04
ACKR3P25106 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.29■□□□□ 0.04
ACKR3P25106 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.29■□□□□ 0.04
ACKR3P25106 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.29■□□□□ 0.04
ACKR3P25106 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.29■□□□□ 0.04
ACKR3P25106 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ACKR3P25106 LINC01451-201ENST00000623792 534 ntBASIC15.29■□□□□ 0.04
ACKR3P25106 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACKR3P25106 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms