Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 AP001005.1-201ENST00000571755 1248 ntBASIC16.71■□□□□ 0.27
MMP11P24347 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP11P24347 MTDHP3-201ENST00000594186 672 ntBASIC16.71■□□□□ 0.27
MMP11P24347 AP001269.4-201ENST00000609611 512 ntBASIC16.71■□□□□ 0.27
MMP11P24347 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP11P24347 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
MMP11P24347 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 AC139713.2-201ENST00000641328 2723 ntBASIC16.71■□□□□ 0.27
MMP11P24347 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.71■□□□□ 0.26
MMP11P24347 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 AC097374.2-201ENST00000618617 1306 ntBASIC16.7■□□□□ 0.26
MMP11P24347 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MMP11P24347 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 AC093010.1-201ENST00000473625 1624 ntBASIC16.7■□□□□ 0.26
MMP11P24347 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP11P24347 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MMP11P24347 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.7■□□□□ 0.26
MMP11P24347 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP11P24347 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP11P24347 AL022342.1-201ENST00000400363 863 ntBASIC16.7■□□□□ 0.26
MMP11P24347 AP000347.1-202ENST00000435868 847 ntBASIC16.7■□□□□ 0.26
MMP11P24347 FGFR3P6-201ENST00000457012 610 ntBASIC16.7■□□□□ 0.26
MMP11P24347 SCARNA2-201ENST00000458748 420 ntBASIC16.7■□□□□ 0.26
MMP11P24347 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP11P24347 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP11P24347 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.7■□□□□ 0.26
MMP11P24347 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP11P24347 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP11P24347 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MMP11P24347 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MMP11P24347 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP11P24347 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.7■□□□□ 0.26
MMP11P24347 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP11P24347 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP11P24347 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP11P24347 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
MMP11P24347 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MMP11P24347 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.69■□□□□ 0.26
MMP11P24347 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP11P24347 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP11P24347 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
MMP11P24347 ABCD1P5-201ENST00000445663 754 ntBASIC16.69■□□□□ 0.26
MMP11P24347 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP11P24347 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP11P24347 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.69■□□□□ 0.26
MMP11P24347 BX640515.1-201ENST00000617215 977 ntBASIC16.69■□□□□ 0.26
MMP11P24347 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP11P24347 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP11P24347 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 AP005117.1-201ENST00000584346 1413 ntBASIC16.69■□□□□ 0.26
MMP11P24347 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MMP11P24347 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP11P24347 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP11P24347 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP11P24347 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MMP11P24347 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP11P24347 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
MMP11P24347 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms