Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN3P20807 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CAPN3P20807 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CAPN3P20807 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN3P20807 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN3P20807 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CAPN3P20807 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CAPN3P20807 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN3P20807 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CAPN3P20807 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN3P20807 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.95■□□□□ 0.3
CAPN3P20807 FAM86EP-206ENST00000510506 987 ntBASIC16.95■□□□□ 0.3
CAPN3P20807 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.95■□□□□ 0.3
CAPN3P20807 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN3P20807 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
CAPN3P20807 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CAPN3P20807 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN3P20807 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN3P20807 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CAPN3P20807 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN3P20807 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN3P20807 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN3P20807 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
CAPN3P20807 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN3P20807 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN3P20807 AC113404.2-201ENST00000507884 177 ntBASIC16.94■□□□□ 0.3
CAPN3P20807 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.94■□□□□ 0.3
CAPN3P20807 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CAPN3P20807 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.94■□□□□ 0.3
CAPN3P20807 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.94■□□□□ 0.3
CAPN3P20807 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 AL157888.1-201ENST00000631930 593 ntBASIC16.94■□□□□ 0.3
CAPN3P20807 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.94■□□□□ 0.3
CAPN3P20807 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN3P20807 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN3P20807 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN3P20807 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CAPN3P20807 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN3P20807 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CAPN3P20807 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN3P20807 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN3P20807 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
CAPN3P20807 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 AC018695.7-201ENST00000624587 2492 ntBASIC16.93■□□□□ 0.3
CAPN3P20807 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN3P20807 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CAPN3P20807 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN3P20807 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN3P20807 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN3P20807 HCG4P8-203ENST00000443049 980 ntBASIC16.93■□□□□ 0.3
CAPN3P20807 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CAPN3P20807 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.93■□□□□ 0.3
CAPN3P20807 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.93■□□□□ 0.3
CAPN3P20807 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.93■□□□□ 0.3
CAPN3P20807 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms