Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
RAB4AP20338 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.51□□□□□ -0.25
RAB4AP20338 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB4AP20338 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB4AP20338 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB4AP20338 AC008556.1-201ENST00000610908 2040 ntBASIC13.51□□□□□ -0.25
RAB4AP20338 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 OR2I1P-209ENST00000641730 5365 ntBASIC13.5□□□□□ -0.25
RAB4AP20338 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 AC022188.1-201ENST00000620960 1664 ntBASIC13.5□□□□□ -0.25
RAB4AP20338 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAB4AP20338 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 KRT8P45-201ENST00000414328 1447 ntBASIC13.5□□□□□ -0.25
RAB4AP20338 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB4AP20338 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RAB4AP20338 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAB4AP20338 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB4AP20338 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
RAB4AP20338 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB4AP20338 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB4AP20338 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB4AP20338 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
RAB4AP20338 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RAB4AP20338 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB4AP20338 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
RAB4AP20338 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB4AP20338 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.49□□□□□ -0.25
RAB4AP20338 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
RAB4AP20338 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 AL160286.2-201ENST00000567150 934 ntBASIC13.49□□□□□ -0.25
RAB4AP20338 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.49□□□□□ -0.25
RAB4AP20338 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms