Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 AC025678.2-201ENST00000562061 970 ntBASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 REXO1L3P-201ENST00000622202 1288 ntBASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSB-PGBD3P0DP91 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 AC092919.2-201ENST00000623631 1645 ntBASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSB-PGBD3P0DP91 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 AC006116.8-202ENST00000587620 1550 ntBASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 COX20P2-201ENST00000452636 358 ntBASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 AC109322.1-201ENST00000524499 1264 ntBASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 AC022145.2-201ENST00000598203 171 ntBASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSB-PGBD3P0DP91 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 PTMS-202ENST00000389462 773 ntTSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 AC092474.2-201ENST00000424288 719 ntBASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 AC023141.5-201ENST00000458585 616 ntBASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 AC002558.1-201ENST00000488906 803 ntBASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 HLA-J-203ENST00000494367 1087 ntBASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 CROCCP3-202ENST00000420820 1947 ntBASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CSB-PGBD3P0DP91 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.14■■□□□ 1.3
CSB-PGBD3P0DP91 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CSB-PGBD3P0DP91 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CSB-PGBD3P0DP91 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 MYCLP1-201ENST00000372451 1075 ntBASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 AL513480.1-201ENST00000451731 511 ntBASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 LINC00628-201ENST00000628516 1289 ntBASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSB-PGBD3P0DP91 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms