Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A2P08572 FAM58DP-201ENST00000428076 619 ntBASIC17.52■□□□□ 0.4
COL4A2P08572 AC069335.1-201ENST00000489972 472 ntBASIC17.52■□□□□ 0.4
COL4A2P08572 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A2P08572 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A2P08572 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A2P08572 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A2P08572 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A2P08572 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
COL4A2P08572 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
COL4A2P08572 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COL4A2P08572 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A2P08572 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A2P08572 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A2P08572 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A2P08572 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A2P08572 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.52■□□□□ 0.39
COL4A2P08572 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A2P08572 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.52■□□□□ 0.39
COL4A2P08572 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A2P08572 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.52■□□□□ 0.39
COL4A2P08572 RARRES2P8-201ENST00000566335 367 ntBASIC17.52■□□□□ 0.39
COL4A2P08572 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.52■□□□□ 0.39
COL4A2P08572 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A2P08572 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
COL4A2P08572 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A2P08572 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A2P08572 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
COL4A2P08572 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A2P08572 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 RN7SL589P-201ENST00000481268 310 ntBASIC17.51■□□□□ 0.39
COL4A2P08572 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL4A2P08572 AC079140.1-201ENST00000508039 487 ntBASIC17.51■□□□□ 0.39
COL4A2P08572 AC069262.1-201ENST00000539058 672 ntBASIC17.51■□□□□ 0.39
COL4A2P08572 AC025678.2-201ENST00000562061 970 ntBASIC17.51■□□□□ 0.39
COL4A2P08572 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
COL4A2P08572 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A2P08572 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A2P08572 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A2P08572 LINC00304-203ENST00000565008 1864 ntBASIC17.51■□□□□ 0.39
COL4A2P08572 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL4A2P08572 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 AC002056.1-201ENST00000395613 760 ntBASIC17.5■□□□□ 0.39
COL4A2P08572 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A2P08572 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.5■□□□□ 0.39
COL4A2P08572 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.5■□□□□ 0.39
COL4A2P08572 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A2P08572 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A2P08572 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A2P08572 FLJ13224-201ENST00000313737 1514 ntBASIC17.5■□□□□ 0.39
COL4A2P08572 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A2P08572 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A2P08572 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL4A2P08572 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.5■□□□□ 0.39
COL4A2P08572 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
COL4A2P08572 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A2P08572 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 TFAMP1-201ENST00000412727 736 ntBASIC17.5■□□□□ 0.39
COL4A2P08572 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A2P08572 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.5■□□□□ 0.39
COL4A2P08572 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A2P08572 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A2P08572 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A2P08572 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A2P08572 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
COL4A2P08572 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL4A2P08572 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL4A2P08572 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A2P08572 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A2P08572 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A2P08572 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COL4A2P08572 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A2P08572 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.49■□□□□ 0.39
COL4A2P08572 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A2P08572 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL4A2P08572 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A2P08572 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms