Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.36■□□□□ 0.69
MMP3P08254 AL135999.2-201ENST00000622438 1686 ntBASIC19.36■□□□□ 0.69
MMP3P08254 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 AC087289.5-201ENST00000586076 3175 ntBASIC19.36■□□□□ 0.69
MMP3P08254 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
MMP3P08254 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
MMP3P08254 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP3P08254 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP3P08254 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 AC025580.3-201ENST00000617932 1424 ntBASIC19.35■□□□□ 0.69
MMP3P08254 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP3P08254 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 CEND1P1-201ENST00000451006 455 ntBASIC19.35■□□□□ 0.69
MMP3P08254 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
MMP3P08254 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.35■□□□□ 0.69
MMP3P08254 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP3P08254 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP3P08254 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP3P08254 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
MMP3P08254 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP3P08254 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP3P08254 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP3P08254 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 CNN2P11-201ENST00000429351 262 ntBASIC19.34■□□□□ 0.69
MMP3P08254 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP3P08254 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.34■□□□□ 0.69
MMP3P08254 AL031432.2-201ENST00000566714 459 ntBASIC19.34■□□□□ 0.69
MMP3P08254 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
MMP3P08254 AL928711.1-201ENST00000570165 459 ntBASIC19.34■□□□□ 0.69
MMP3P08254 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.34■□□□□ 0.69
MMP3P08254 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP3P08254 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
MMP3P08254 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.34■□□□□ 0.69
MMP3P08254 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP3P08254 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MMP3P08254 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MMP3P08254 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.33■□□□□ 0.69
MMP3P08254 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MMP3P08254 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
MMP3P08254 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
MMP3P08254 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP3P08254 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP3P08254 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
MMP3P08254 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP3P08254 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP3P08254 AC074386.1-202ENST00000463561 864 ntBASIC19.33■□□□□ 0.68
MMP3P08254 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP3P08254 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP3P08254 CXCL1P1-201ENST00000502804 216 ntBASIC19.33■□□□□ 0.68
MMP3P08254 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP3P08254 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.33■□□□□ 0.68
MMP3P08254 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP3P08254 AC023141.13-201ENST00000604991 943 ntBASIC19.33■□□□□ 0.68
MMP3P08254 AC007064.4-201ENST00000637740 555 ntBASIC19.33■□□□□ 0.68
MMP3P08254 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
MMP3P08254 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP3P08254 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP3P08254 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MMP3P08254 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
MMP3P08254 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
MMP3P08254 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP3P08254 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
MMP3P08254 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.33■□□□□ 0.68
MMP3P08254 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms