Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.63■□□□□ 0.25
CTSBP07858 RPL13AP23-201ENST00000480739 586 ntBASIC16.63■□□□□ 0.25
CTSBP07858 AC093909.1-201ENST00000504731 1122 ntBASIC16.63■□□□□ 0.25
CTSBP07858 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.63■□□□□ 0.25
CTSBP07858 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.63■□□□□ 0.25
CTSBP07858 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.63■□□□□ 0.25
CTSBP07858 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.63■□□□□ 0.25
CTSBP07858 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSBP07858 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSBP07858 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSBP07858 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 HLA-J-201ENST00000462773 1622 ntBASIC16.63■□□□□ 0.25
CTSBP07858 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTSBP07858 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.63■□□□□ 0.25
CTSBP07858 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSBP07858 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 AC073621.1-201ENST00000392730 636 ntBASIC16.62■□□□□ 0.25
CTSBP07858 KRT18P27-201ENST00000427733 1299 ntBASIC16.62■□□□□ 0.25
CTSBP07858 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.62■□□□□ 0.25
CTSBP07858 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.62■□□□□ 0.25
CTSBP07858 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.62■□□□□ 0.25
CTSBP07858 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSBP07858 AC105339.3-201ENST00000560043 636 ntBASIC16.62■□□□□ 0.25
CTSBP07858 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 AC117500.6-201ENST00000624871 588 ntBASIC16.62■□□□□ 0.25
CTSBP07858 AC006504.4-201ENST00000592118 1568 ntBASIC16.62■□□□□ 0.25
CTSBP07858 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSBP07858 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTSBP07858 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTSBP07858 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
CTSBP07858 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CTSBP07858 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.61■□□□□ 0.25
CTSBP07858 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTSBP07858 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTSBP07858 FZD10-202ENST00000539839 3282 ntBASIC16.61■□□□□ 0.25
CTSBP07858 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 RPS2P28-201ENST00000314255 741 ntBASIC16.61■□□□□ 0.25
CTSBP07858 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 MIR574-201ENST00000385209 96 ntBASIC16.61■□□□□ 0.25
CTSBP07858 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTSBP07858 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.61■□□□□ 0.25
CTSBP07858 LAGE3P1-201ENST00000425356 484 ntBASIC16.61■□□□□ 0.25
CTSBP07858 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.61■□□□□ 0.25
CTSBP07858 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTSBP07858 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.61■□□□□ 0.25
CTSBP07858 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTSBP07858 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
CTSBP07858 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CTSBP07858 AC104109.2-201ENST00000602919 1418 ntBASIC16.61■□□□□ 0.25
CTSBP07858 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSBP07858 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTSBP07858 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSBP07858 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSBP07858 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTSBP07858 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTSBP07858 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
CTSBP07858 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms