Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOD2P04179 CXCL1P1-201ENST00000502804 216 ntBASIC18.43■□□□□ 0.54
SOD2P04179 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOD2P04179 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.43■□□□□ 0.54
SOD2P04179 AL031432.2-201ENST00000566714 459 ntBASIC18.43■□□□□ 0.54
SOD2P04179 AL928711.1-201ENST00000570165 459 ntBASIC18.43■□□□□ 0.54
SOD2P04179 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.43■□□□□ 0.54
SOD2P04179 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.43■□□□□ 0.54
SOD2P04179 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.43■□□□□ 0.54
SOD2P04179 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.43■□□□□ 0.54
SOD2P04179 AC046185.3-201ENST00000623228 1824 ntBASIC18.43■□□□□ 0.54
SOD2P04179 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOD2P04179 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.43■□□□□ 0.54
SOD2P04179 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SOD2P04179 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOD2P04179 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.43■□□□□ 0.54
SOD2P04179 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOD2P04179 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.43■□□□□ 0.54
SOD2P04179 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SOD2P04179 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.42■□□□□ 0.54
SOD2P04179 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.42■□□□□ 0.54
SOD2P04179 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.42■□□□□ 0.54
SOD2P04179 ACTG1P14-201ENST00000446382 1122 ntBASIC18.42■□□□□ 0.54
SOD2P04179 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.42■□□□□ 0.54
SOD2P04179 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SOD2P04179 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.42■□□□□ 0.54
SOD2P04179 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.42■□□□□ 0.54
SOD2P04179 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.42■□□□□ 0.54
SOD2P04179 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SOD2P04179 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SOD2P04179 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOD2P04179 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 AL135999.2-201ENST00000622438 1686 ntBASIC18.41■□□□□ 0.54
SOD2P04179 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SOD2P04179 REXO1L11P-201ENST00000620964 1927 ntBASIC18.41■□□□□ 0.54
SOD2P04179 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
SOD2P04179 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.41■□□□□ 0.54
SOD2P04179 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.41■□□□□ 0.54
SOD2P04179 FAM58CP-201ENST00000435741 640 ntBASIC18.41■□□□□ 0.54
SOD2P04179 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.41■□□□□ 0.54
SOD2P04179 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.41■□□□□ 0.54
SOD2P04179 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.41■□□□□ 0.54
SOD2P04179 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.41■□□□□ 0.54
SOD2P04179 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.41■□□□□ 0.54
SOD2P04179 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.41■□□□□ 0.54
SOD2P04179 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SOD2P04179 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.41■□□□□ 0.54
SOD2P04179 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SOD2P04179 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOD2P04179 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.4■□□□□ 0.54
SOD2P04179 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.4■□□□□ 0.54
SOD2P04179 AC138028.4-201ENST00000564984 1845 ntBASIC18.4■□□□□ 0.54
SOD2P04179 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.4■□□□□ 0.54
SOD2P04179 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.4■□□□□ 0.54
SOD2P04179 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.4■□□□□ 0.54
SOD2P04179 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.4■□□□□ 0.54
SOD2P04179 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.4■□□□□ 0.54
SOD2P04179 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.4■□□□□ 0.54
SOD2P04179 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.4■□□□□ 0.54
SOD2P04179 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.4■□□□□ 0.54
SOD2P04179 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.4■□□□□ 0.54
SOD2P04179 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.4■□□□□ 0.54
SOD2P04179 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOD2P04179 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms