Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 KRT17P3-201ENST00000420566 1262 ntBASIC12.81□□□□□ -0.36
TNFRSF6BO95407 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 KRT18P23-201ENST00000435622 1283 ntBASIC12.81□□□□□ -0.36
TNFRSF6BO95407 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AL353708.3-201ENST00000610272 989 ntBASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AL023875.1-201ENST00000640777 796 ntBASIC12.81□□□□□ -0.36
TNFRSF6BO95407 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AC126755.1-201ENST00000525846 6405 ntBASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TNFRSF6BO95407 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 KRT16P1-201ENST00000399124 1418 ntBASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 AC098934.4-201ENST00000564127 592 ntBASIC12.8□□□□□ -0.36
TNFRSF6BO95407 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 AC069544.1-201ENST00000609399 999 ntBASIC12.8□□□□□ -0.36
TNFRSF6BO95407 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.8□□□□□ -0.36
TNFRSF6BO95407 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 AL596257.1-201ENST00000641463 2694 ntBASIC12.8□□□□□ -0.36
TNFRSF6BO95407 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.8□□□□□ -0.36
TNFRSF6BO95407 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 AC026691.1-201ENST00000602502 2017 ntBASIC12.79□□□□□ -0.36
TNFRSF6BO95407 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 PCDHB17P-201ENST00000539533 2393 ntBASIC12.79□□□□□ -0.36
TNFRSF6BO95407 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 AC009949.1-201ENST00000623048 1830 ntBASIC12.79□□□□□ -0.36
TNFRSF6BO95407 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFRSF6BO95407 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms