Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 AC246785.2-201ENST00000432512 513 ntBASIC17.1■□□□□ 0.33
CNOT3O75175 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT3O75175 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT3O75175 AC113404.2-201ENST00000507884 177 ntBASIC17.1■□□□□ 0.33
CNOT3O75175 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CNOT3O75175 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 AC138894.3-201ENST00000603787 634 ntBASIC17.1■□□□□ 0.33
CNOT3O75175 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT3O75175 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT3O75175 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.1■□□□□ 0.33
CNOT3O75175 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT3O75175 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNOT3O75175 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CNOT3O75175 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT3O75175 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT3O75175 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT3O75175 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 EMBP1-201ENST00000458200 901 ntBASIC17.09■□□□□ 0.33
CNOT3O75175 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT3O75175 KRT18P31-201ENST00000506277 1292 ntBASIC17.09■□□□□ 0.33
CNOT3O75175 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.09■□□□□ 0.33
CNOT3O75175 Z69720.1-201ENST00000601483 472 ntBASIC17.09■□□□□ 0.33
CNOT3O75175 AC099336.1-202ENST00000602961 463 ntBASIC17.09■□□□□ 0.33
CNOT3O75175 AL353801.3-201ENST00000609898 542 ntBASIC17.09■□□□□ 0.33
CNOT3O75175 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 AC126763.1-201ENST00000552015 2118 ntBASIC17.09■□□□□ 0.33
CNOT3O75175 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CNOT3O75175 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT3O75175 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CNOT3O75175 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT3O75175 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT3O75175 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT3O75175 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT3O75175 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT3O75175 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT3O75175 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT3O75175 NSUN5P1-202ENST00000421140 1535 ntBASIC17.08■□□□□ 0.32
CNOT3O75175 NSUN5P2-203ENST00000457352 1529 ntBASIC17.08■□□□□ 0.32
CNOT3O75175 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CNOT3O75175 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT3O75175 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.08■□□□□ 0.32
CNOT3O75175 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNOT3O75175 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.08■□□□□ 0.32
CNOT3O75175 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNOT3O75175 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT3O75175 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT3O75175 GNAS-203ENST00000306120 1878 ntBASIC17.07■□□□□ 0.32
CNOT3O75175 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms