Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 AC079776.4-201ENST00000511039 504 ntBASIC16.53■□□□□ 0.24
PRAMEF2O60811 AF238378.1-201ENST00000526806 358 ntBASIC16.53■□□□□ 0.24
PRAMEF2O60811 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 AC005336.2-201ENST00000593183 939 ntBASIC16.53■□□□□ 0.24
PRAMEF2O60811 AL138831.2-201ENST00000606564 490 ntBASIC16.53■□□□□ 0.24
PRAMEF2O60811 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF2O60811 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 MRPL3P1-201ENST00000400109 1033 ntBASIC16.52■□□□□ 0.24
PRAMEF2O60811 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 AP000347.1-202ENST00000435868 847 ntBASIC16.52■□□□□ 0.24
PRAMEF2O60811 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEF2O60811 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF2O60811 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PRAMEF2O60811 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEF2O60811 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF2O60811 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF2O60811 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEF2O60811 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF2O60811 AL022342.1-201ENST00000400363 863 ntBASIC16.51■□□□□ 0.23
PRAMEF2O60811 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.51■□□□□ 0.23
PRAMEF2O60811 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms