Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VEGFDO43915 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.24■□□□□ 0.35
VEGFDO43915 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
VEGFDO43915 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VEGFDO43915 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.24■□□□□ 0.35
VEGFDO43915 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.24■□□□□ 0.35
VEGFDO43915 RNPS1P1-201ENST00000507437 918 ntBASIC17.24■□□□□ 0.35
VEGFDO43915 AC021087.4-201ENST00000563761 564 ntBASIC17.24■□□□□ 0.35
VEGFDO43915 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.24■□□□□ 0.35
VEGFDO43915 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VEGFDO43915 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VEGFDO43915 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.24■□□□□ 0.35
VEGFDO43915 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VEGFDO43915 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VEGFDO43915 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.23■□□□□ 0.35
VEGFDO43915 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VEGFDO43915 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VEGFDO43915 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.23■□□□□ 0.35
VEGFDO43915 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.23■□□□□ 0.35
VEGFDO43915 BX005266.1-201ENST00000473402 457 ntBASIC17.23■□□□□ 0.35
VEGFDO43915 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.23■□□□□ 0.35
VEGFDO43915 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.23■□□□□ 0.35
VEGFDO43915 MTDHP4-201ENST00000600287 670 ntBASIC17.23■□□□□ 0.35
VEGFDO43915 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.23■□□□□ 0.35
VEGFDO43915 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.23■□□□□ 0.35
VEGFDO43915 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VEGFDO43915 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VEGFDO43915 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 RPS2P28-201ENST00000314255 741 ntBASIC17.22■□□□□ 0.35
VEGFDO43915 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.22■□□□□ 0.35
VEGFDO43915 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.22■□□□□ 0.35
VEGFDO43915 FDX1P1-201ENST00000449115 551 ntBASIC17.22■□□□□ 0.35
VEGFDO43915 AC018712.1-201ENST00000455767 687 ntBASIC17.22■□□□□ 0.35
VEGFDO43915 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VEGFDO43915 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VEGFDO43915 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.22■□□□□ 0.35
VEGFDO43915 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.22■□□□□ 0.35
VEGFDO43915 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.22■□□□□ 0.35
VEGFDO43915 AL773604.1-201ENST00000617417 272 ntBASIC17.22■□□□□ 0.35
VEGFDO43915 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
VEGFDO43915 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VEGFDO43915 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms