Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.01□□□□□ -0.01
SSNA1O43805 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.01□□□□□ -0.01
SSNA1O43805 AL512625.2-201ENST00000417533 625 ntBASIC15.01□□□□□ -0.01
SSNA1O43805 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.01□□□□□ -0.01
SSNA1O43805 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSNA1O43805 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.01□□□□□ -0.01
SSNA1O43805 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 AL662844.4-201ENST00000606367 2838 ntBASIC15□□□□□ -0.01
SSNA1O43805 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15□□□□□ -0.01
SSNA1O43805 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 PRSS44-201ENST00000515154 1146 ntBASIC15□□□□□ -0.01
SSNA1O43805 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15□□□□□ -0.01
SSNA1O43805 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 SDHAP2-201ENST00000455183 2001 ntBASIC15□□□□□ -0.01
SSNA1O43805 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSNA1O43805 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SSNA1O43805 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 AL109659.2-201ENST00000606809 1674 ntBASIC15□□□□□ -0.01
SSNA1O43805 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSNA1O43805 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
SSNA1O43805 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SSNA1O43805 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 AC100803.2-201ENST00000562459 1963 ntBASIC14.99□□□□□ -0.01
SSNA1O43805 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
SSNA1O43805 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.99□□□□□ -0.01
SSNA1O43805 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 AL121829.2-201ENST00000620908 328 ntBASIC14.99□□□□□ -0.01
SSNA1O43805 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 AC009102.3-201ENST00000623118 1491 ntBASIC14.99□□□□□ -0.01
SSNA1O43805 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms