Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF13O43567 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF13O43567 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF13O43567 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
RNF13O43567 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 AL121761.2-201ENST00000598007 1648 ntBASIC16.05■□□□□ 0.16
RNF13O43567 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF13O43567 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 MIR662-201ENST00000384847 95 ntBASIC16.05■□□□□ 0.16
RNF13O43567 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF13O43567 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF13O43567 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF13O43567 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.05■□□□□ 0.16
RNF13O43567 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 GPR32P1-201ENST00000601788 811 ntBASIC16.05■□□□□ 0.16
RNF13O43567 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF13O43567 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.05■□□□□ 0.16
RNF13O43567 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF13O43567 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF13O43567 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF13O43567 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF13O43567 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF13O43567 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
RNF13O43567 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 AL353692.3-201ENST00000407031 1396 ntBASIC16.04■□□□□ 0.16
RNF13O43567 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 AC009949.1-201ENST00000623048 1830 ntBASIC16.04■□□□□ 0.16
RNF13O43567 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 RCN1P1-201ENST00000400413 996 ntBASIC16.04■□□□□ 0.16
RNF13O43567 TMPOP1-202ENST00000424642 1267 ntBASIC16.04■□□□□ 0.16
RNF13O43567 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.04■□□□□ 0.16
RNF13O43567 AC063952.2-201ENST00000498792 1227 ntBASIC16.04■□□□□ 0.16
RNF13O43567 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF13O43567 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF13O43567 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF13O43567 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF13O43567 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RNF13O43567 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF13O43567 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF13O43567 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF13O43567 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF13O43567 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF13O43567 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF13O43567 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF13O43567 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF13O43567 VENTXP5-201ENST00000523979 775 ntBASIC16.03■□□□□ 0.16
RNF13O43567 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms